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	<title>Comments for Absolute Geeky</title>
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	<link>http://absolutegeeky.com</link>
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		<title>Comment on Life with a synthetic genome by Aparna</title>
		<link>http://absolutegeeky.com/2010/05/life-with-a-synthetic-genome/comment-page-1/#comment-192</link>
		<dc:creator>Aparna</dc:creator>
		<pubDate>Tue, 25 May 2010 04:15:15 +0000</pubDate>
		<guid isPermaLink="false">http://absolutegeeky.com/?p=131#comment-192</guid>
		<description>What other scientists have to say about it: http://www.nature.com/nature/journal/vaop/ncurrent/pdf/465422a.pdf</description>
		<content:encoded><![CDATA[<p>What other scientists have to say about it: <a href="http://www.nature.com/nature/journal/vaop/ncurrent/pdf/465422a.pdf" rel="nofollow">http://www.nature.com/nature/journal/vaop/ncurrent/pdf/465422a.pdf</a></p>
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		<title>Comment on Doctor Who and The pH below by Heidi</title>
		<link>http://absolutegeeky.com/2010/04/doctor-who-and-the-ph-below/comment-page-1/#comment-53</link>
		<dc:creator>Heidi</dc:creator>
		<pubDate>Wed, 14 Apr 2010 03:18:40 +0000</pubDate>
		<guid isPermaLink="false">http://absolutegeeky.com/?p=114#comment-53</guid>
		<description>Maybe steampunk never goes out of fashion!

Good catch.</description>
		<content:encoded><![CDATA[<p>Maybe steampunk never goes out of fashion!</p>
<p>Good catch.</p>
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		<title>Comment on I&#8217;m back! by Akshay Surve</title>
		<link>http://absolutegeeky.com/2009/01/im-back/comment-page-1/#comment-31</link>
		<dc:creator>Akshay Surve</dc:creator>
		<pubDate>Fri, 30 Oct 2009 07:25:59 +0000</pubDate>
		<guid isPermaLink="false">http://absolutegeeky.com/?p=38#comment-31</guid>
		<description>&lt;blockquote&gt;
A significant proportion of my blog posts are of the “I’m back” variety. Well, maybe not on this blog… Not yet at least.
&lt;/blockquote&gt;

More &#039;I&#039;m back&#039; posts?</description>
		<content:encoded><![CDATA[<blockquote><p>
A significant proportion of my blog posts are of the “I’m back” variety. Well, maybe not on this blog… Not yet at least.
</p></blockquote>
<p>More &#8216;I&#8217;m back&#8217; posts?</p>
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		<title>Comment on One small step for a bacterium&#8230; by Nash</title>
		<link>http://absolutegeeky.com/2008/06/one-small-step/comment-page-1/#comment-28</link>
		<dc:creator>Nash</dc:creator>
		<pubDate>Thu, 29 Oct 2009 14:56:41 +0000</pubDate>
		<guid isPermaLink="false">http://science.absolutegeeky.com/?p=28#comment-28</guid>
		<description>Now that I read the articles, I understand that what is new here is not that traits evolve, but an understanding of how difficult it can be to tease out the effects of nature and nurture on evolution.

By the way, kudos for having the patience to run a 21 year experiment.</description>
		<content:encoded><![CDATA[<p>Now that I read the articles, I understand that what is new here is not that traits evolve, but an understanding of how difficult it can be to tease out the effects of nature and nurture on evolution.</p>
<p>By the way, kudos for having the patience to run a 21 year experiment.</p>
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		<title>Comment on One small step for a bacterium&#8230; by Ashwan</title>
		<link>http://absolutegeeky.com/2008/06/one-small-step/comment-page-1/#comment-27</link>
		<dc:creator>Ashwan</dc:creator>
		<pubDate>Thu, 29 Oct 2009 05:00:22 +0000</pubDate>
		<guid isPermaLink="false">http://science.absolutegeeky.com/?p=28#comment-27</guid>
		<description>You bring up a good point about speciation for bacteria. In fact the strain used in these experiments did not carry the F plasmid and so reproduction was completely asexual.

But they did carry out experiments that showed that in the &quot;evolved&quot; line recombination with the ancestor was inhibited and thus demonstrated &quot;incipient speciation&quot;

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&amp;cmd=Retrieve&amp;dopt=AbstractPlus&amp;list_uids=10377417&amp;query_hl=5&amp;itool=pubmed_DocSum</description>
		<content:encoded><![CDATA[<p>You bring up a good point about speciation for bacteria. In fact the strain used in these experiments did not carry the F plasmid and so reproduction was completely asexual.</p>
<p>But they did carry out experiments that showed that in the &#8220;evolved&#8221; line recombination with the ancestor was inhibited and thus demonstrated &#8220;incipient speciation&#8221;</p>
<p><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&amp;cmd=Retrieve&amp;dopt=AbstractPlus&amp;list_uids=10377417&amp;query_hl=5&amp;itool=pubmed_DocSum" rel="nofollow">http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&amp;cmd=Retrieve&amp;dopt=AbstractPlus&amp;list_uids=10377417&amp;query_hl=5&amp;itool=pubmed_DocSum</a></p>
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		<title>Comment on One small step for a bacterium&#8230; by Ashwan</title>
		<link>http://absolutegeeky.com/2008/06/one-small-step/comment-page-1/#comment-26</link>
		<dc:creator>Ashwan</dc:creator>
		<pubDate>Thu, 29 Oct 2009 04:49:50 +0000</pubDate>
		<guid isPermaLink="false">http://science.absolutegeeky.com/?p=28#comment-26</guid>
		<description>Considering that all 12 lines had the same ancestor, where did that &quot;hidden species&quot; come from?

Of course, Lenski isn&#039;t claiming this is speciation at all, but nevertheless it&#039;s a demonstration of a new trait evolving when previously there wasn&#039;t one.

This is now an &quot;old&quot; paper, earlier this month they published new work where they sequenced the genome of the different lines and also ancestral ones to figure out what genetic changes occurred.

http://www.scientificamerican.com/blog/post.cfm?id=evolution-details-revealed-through-2009-10-18

(Don&#039;t have a link to the paper from Nature unfortunately and I haven&#039;t read it yet myself.)</description>
		<content:encoded><![CDATA[<p>Considering that all 12 lines had the same ancestor, where did that &#8220;hidden species&#8221; come from?</p>
<p>Of course, Lenski isn&#8217;t claiming this is speciation at all, but nevertheless it&#8217;s a demonstration of a new trait evolving when previously there wasn&#8217;t one.</p>
<p>This is now an &#8220;old&#8221; paper, earlier this month they published new work where they sequenced the genome of the different lines and also ancestral ones to figure out what genetic changes occurred.</p>
<p><a href="http://www.scientificamerican.com/blog/post.cfm?id=evolution-details-revealed-through-2009-10-18" rel="nofollow">http://www.scientificamerican.com/blog/post.cfm?id=evolution-details-revealed-through-2009-10-18</a></p>
<p>(Don&#8217;t have a link to the paper from Nature unfortunately and I haven&#8217;t read it yet myself.)</p>
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		<title>Comment on One small step for a bacterium&#8230; by Nash</title>
		<link>http://absolutegeeky.com/2008/06/one-small-step/comment-page-1/#comment-25</link>
		<dc:creator>Nash</dc:creator>
		<pubDate>Thu, 29 Oct 2009 02:35:31 +0000</pubDate>
		<guid isPermaLink="false">http://science.absolutegeeky.com/?p=28#comment-25</guid>
		<description>Oh boy, his experiment counts as a fail.

Since there turned out to be one strain that evolved Cit+ness reproducibly , and others did not - this means that there were already on some hidden(to us) biochemical or molecular level, two distinct species - one that had the potential to evolve Cit+ness and the other not.

In this light, the experiment does not show speciation, but merely the fact that variation can occur - which is not exactly news.

In any case, for bacteria and many other simple asexually reproducing organisms the concept of &quot;species&quot; is a not discrete, but a continuum. The test for speciation in the lab would be variation that leads to reproductive isolation , and thus splitting of a single population into two distinct populations with no chance of creating a hybrid progeny.</description>
		<content:encoded><![CDATA[<p>Oh boy, his experiment counts as a fail.</p>
<p>Since there turned out to be one strain that evolved Cit+ness reproducibly , and others did not &#8211; this means that there were already on some hidden(to us) biochemical or molecular level, two distinct species &#8211; one that had the potential to evolve Cit+ness and the other not.</p>
<p>In this light, the experiment does not show speciation, but merely the fact that variation can occur &#8211; which is not exactly news.</p>
<p>In any case, for bacteria and many other simple asexually reproducing organisms the concept of &#8220;species&#8221; is a not discrete, but a continuum. The test for speciation in the lab would be variation that leads to reproductive isolation , and thus splitting of a single population into two distinct populations with no chance of creating a hybrid progeny.</p>
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		<title>Comment on I&#8217;m back! by Jonathan</title>
		<link>http://absolutegeeky.com/2009/01/im-back/comment-page-1/#comment-30</link>
		<dc:creator>Jonathan</dc:creator>
		<pubDate>Mon, 16 Feb 2009 19:20:58 +0000</pubDate>
		<guid isPermaLink="false">http://absolutegeeky.com/?p=38#comment-30</guid>
		<description>What version of WP-MU are you running on? And u defintely need a new theme!</description>
		<content:encoded><![CDATA[<p>What version of WP-MU are you running on? And u defintely need a new theme!</p>
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		<title>Comment on I&#8217;m back! by Harsh</title>
		<link>http://absolutegeeky.com/2009/01/im-back/comment-page-1/#comment-29</link>
		<dc:creator>Harsh</dc:creator>
		<pubDate>Wed, 11 Feb 2009 15:56:09 +0000</pubDate>
		<guid isPermaLink="false">http://absolutegeeky.com/?p=38#comment-29</guid>
		<description>delete comments directly from the tables :-)</description>
		<content:encoded><![CDATA[<p>delete comments directly from the tables <img src='http://absolutegeeky.com/wp-includes/images/smilies/icon_smile.gif' alt=':-)' class='wp-smiley' /> </p>
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		<title>Comment on The State of Evolution by imtyaz</title>
		<link>http://absolutegeeky.com/2007/06/the-state-of-evolution/comment-page-1/#comment-23</link>
		<dc:creator>imtyaz</dc:creator>
		<pubDate>Sat, 20 Sep 2008 21:08:05 +0000</pubDate>
		<guid isPermaLink="false">http://science.absolutegeeky.com/2007/06/06/the-state-of-evolution/#comment-23</guid>
		<description>how they evolve. i just want to see animation on that

[WORDPRESS HASHCASH] The poster sent us &#039;0 which is not a hashcash value.</description>
		<content:encoded><![CDATA[<p>how they evolve. i just want to see animation on that</p>
<p>[WORDPRESS HASHCASH] The poster sent us &#8217;0 which is not a hashcash value.</p>
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